[parsec-users] Errors while building. Help please

Yungang Bao ybao at CS.Princeton.EDU
Thu Mar 31 13:51:28 EDT 2011


Please check if there exists the "configure" file in your "pkgs/libs/libxml2/src/". If not, you could download and update libxml2 directory.

Best Regards,
Yungang

----- Original Message -----
From: "Aravind Reddy Gayam" <aravindr at buffalo.edu>
To: "PARSEC Users" <parsec-users at lists.cs.princeton.edu>
Sent: Thursday, March 31, 2011 1:31:46 PM
Subject: Re: [parsec-users] Errors while building. Help please


Hello Yungang 

I have followed the instructions you have given. Thanks. 

After a lot of execution, I land up in this error saying : 

. 
. 
. 
cd /home/anusha/Documents/parsec-2.1/bin/../pkgs/libs/zlib/inst/amd64-linux.gcc-pthreads/lib; chmod 755 libz.a 
cd /home/anusha/Documents/parsec-2.1/bin/../pkgs/libs/zlib/inst/amd64-linux.gcc-pthreads/lib; if test -f libz.so.1.2.3; then \ 
rm -f libz.so libz.so.1; \ 
ln -s libz.so.1.2.3 libz.so; \ 
ln -s libz.so.1.2.3 libz.so.1; \ 
(ldconfig || true) >/dev/null 2>&1; \ 
fi 
cp zlib.3 /home/anusha/Documents/parsec-2.1/bin/../pkgs/libs/zlib/inst/amd64-linux.gcc-pthreads/share/man/man3 
chmod 644 /home/anusha/Documents/parsec-2.1/bin/../pkgs/libs/zlib/inst/amd64-linux.gcc-pthreads/share/man/man3/zlib.3 
[PARSEC] [---------- Building package libxml2 ----------] 
[PARSEC] Error: Need 'configure' script or a '[Mm]akefile' to build package libxml2. 

I dont know what kind of a script has to provided to build the libxml2 package. 

Can you please suggest me something. 

Thanks 
Aravind 



On Thu, Mar 31, 2011 at 12:47 PM, Yungang Bao < ybao at cs.princeton.edu > wrote: 


You could follow these instructions: 
1) Modify "CC_HOME" in config/gcc.bldconf; 
2) Run "source env.sh" 
3) Run parsecmgmt 

There is some information you can use: 
1) Run "man parsec" and "man parsecmgmt" to see the manuals 
2) A Tutorial at HPCA'09: http://parsec.cs.princeton.edu/download/tutorial/2.0/parsec-2.0-tutorial.pdf 

Best Regards, 

Yungang 

----- Original Message ----- 
From: "Aravind Reddy Gayam" < aravindr at buffalo.edu > 



To: "PARSEC Users" < parsec-users at lists.cs.princeton.edu > 
Sent: Thursday, March 31, 2011 12:20:39 AM 
Subject: Re: [parsec-users] Errors while building. Help please 


no i haven't done it. 

can u plzz tell me the necessary steps to be followed. 

thanks 


On Wed, Mar 30, 2011 at 5:52 PM, Yungang Bao < ybao at cs.princeton.edu > wrote: 


Hi Aravind, 

Did you run "source env.sh" to set up environment variables before you ran parsecmgmt? 

Yungang 


----- Original Message ----- 
From: "Aravind Reddy Gayam" < aravindr at buffalo.edu > 

To: parsec-users at lists.cs.princeton.edu 



Sent: Wednesday, March 30, 2011 12:30:58 AM 
Subject: [parsec-users] Errors while building. Help please 


Hello all 

I am new to linux and obviously to pasec. 

I was trying to build the parsecmgmt initially for some chosen application (say vips). 

But I landed up in errors. 

This is what I have done: 

./parsecmgmt -a build -p vips -c gcc-pthreads 

Can somebody help me (I set the PATH variable properly). 

I got the following: 

anusha at anusha-HP-G60-Notebook-PC:~/Documents/parsec-2.1/bin$ ./parsecmgmt -a build -p vips -c gcc-pthreads 
/home/anusha/Documents/parsec-2.1/bin/../config/gcc.bldconf: line 92: cat: command not found 
/home/anusha/Documents/parsec-2.1/bin/../config/gcc.bldconf: line 93: cat: command not found 
./parsecmgmt: line 605: date: command not found 
./parsecmgmt: line 610: mkdir: command not found 
./parsecmgmt: line 993: cat: command not found 
./parsecmgmt: line 993: /home/anusha/Documents/parsec-2.1/bin/../log/amd64-linux.gcc-pthreads/build_.log: No such file or directory 
./parsecmgmt: line 994: /home/anusha/Documents/parsec-2.1/bin/../log/amd64-linux.gcc-pthreads/build_.log: No such file or directory 
./parsecmgmt: line 995: /home/anusha/Documents/parsec-2.1/bin/../log/amd64-linux.gcc-pthreads/build_.log: No such file or directory 
tee: /home/anusha/Documents/parsec-2.1/bin/../log/amd64-linux.gcc-pthreads/build_.log: No such file or directory 
[PARSEC] Packages to build: vips 
tee: /home/anusha/Documents/parsec-2.1/bin/../log/amd64-linux.gcc-pthreads/build_.log: No such file or directory 

tee: /home/anusha/Documents/parsec-2.1/bin/../log/amd64-linux.gcc-pthreads/build_.log: No such file or directory 
[PARSEC] [========== Building package vips ==========] 
tee: /home/anusha/Documents/parsec-2.1/bin/../log/amd64-linux.gcc-pthreads/build_.log: No such file or directory 
[PARSEC] [---------- Analyzing package vips ----------] 
tee: /home/anusha/Documents/parsec-2.1/bin/../log/amd64-linux.gcc-pthreads/build_.log: No such file or directory 
[PARSEC] vips depends on: glib libxml2 zlib 
tee: /home/anusha/Documents/parsec-2.1/bin/../log/amd64-linux.gcc-pthreads/build_.log: No such file or directory 
[PARSEC] [---------- Analyzing package glib ----------] 
tee: /home/anusha/Documents/parsec-2.1/bin/../log/amd64-linux.gcc-pthreads/build_.log: No such file or directory 
[PARSEC] glib does not depend on any other packages. 
tee: /home/anusha/Documents/parsec-2.1/bin/../log/amd64-linux.gcc-pthreads/build_.log: No such file or directory 
[PARSEC] [---------- Building package glib ----------] 
./parsecmgmt: line 770: mkdir: command not found 
./parsecmgmt: line 772: pushd: /home/anusha/Documents/parsec-2.1/bin/../pkgs/libs/glib/obj/amd64-linux.gcc-pthreads: No such file or directory 
tee: /home/anusha/Documents/parsec-2.1/bin/../log/amd64-linux.gcc-pthreads/build_.log: No such file or directory 
[PARSEC] Running 'env /home/anusha/Documents/parsec-2.1/bin/../pkgs/libs/glib/src/configure --disable-shared --enable-threads --with-threads=posix --prefix=/home/anusha/Documents/parsec-2.1/bin/../pkgs/libs/glib/inst/amd64-linux.gcc-pthreads': 
/home/anusha/Documents/parsec-2.1/bin/../pkgs/libs/glib/src/configure: 49: chmod: not found 
/home/anusha/Documents/parsec-2.1/bin/../pkgs/libs/glib/src/configure: 49: rm: not found 
tee: /home/anusha/Documents/parsec-2.1/bin/../log/amd64-linux.gcc-pthreads/build_.log: No such file or directory 
/home/anusha/Documents/parsec-2.1/bin/../pkgs/libs/glib/src/configure: line 42: chmod: command not found 
/home/anusha/Documents/parsec-2.1/bin/../pkgs/libs/glib/src/configure: line 48: rm: command not found 
/home/anusha/Documents/parsec-2.1/bin/../pkgs/libs/glib/src/configure: line 486: rm: command not found 
/home/anusha/Documents/parsec-2.1/bin/../pkgs/libs/glib/src/configure: line 490: rm: command not found 
/home/anusha/Documents/parsec-2.1/bin/../pkgs/libs/glib/src/configure: line 491: mkdir: command not found 
/home/anusha/Documents/parsec-2.1/bin/../pkgs/libs/glib/src/configure: line 507: rm: command not found 
/home/anusha/Documents/parsec-2.1/bin/../pkgs/libs/glib/src/configure: line 519: cat: command not found 
/home/anusha/Documents/parsec-2.1/bin/../pkgs/libs/glib/src/configure: line 523: chmod: command not found 
/home/anusha/Documents/parsec-2.1/bin/../pkgs/libs/glib/src/configure: line 529: rm: command not found 
/home/anusha/Documents/parsec-2.1/bin/../pkgs/libs/glib/src/configure: line 698: sed: command not found 
/home/anusha/Documents/parsec-2.1/bin/../pkgs/libs/glib/src/configure: line 1081: sed: command not found 
/home/anusha/Documents/parsec-2.1/bin/../pkgs/libs/glib/src/configure: line 1100: sed: command not found 
/home/anusha/Documents/parsec-2.1/bin/../pkgs/libs/glib/src/configure: line 1297: sed: command not found 
/home/anusha/Documents/parsec-2.1/bin/../pkgs/libs/glib/src/configure: line 1398: ls: command not found 
configure: error: Working directory cannot be determined 
tee: /home/anusha/Documents/parsec-2.1/bin/../log/amd64-linux.gcc-pthreads/build_.log: No such file or directory 
[PARSEC] Error: 'env /home/anusha/Documents/parsec-2.1/bin/../pkgs/libs/glib/src/configure --disable-shared --enable-threads --with-threads=posix --prefix=/home/anusha/Documents/parsec-2.1/bin/../pkgs/libs/glib/inst/amd64-linux.gcc-pthreads' failed. 
./parsecmgmt: line 787: popd: directory stack empty 



Thanks, 
Aravind. 

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