[parsec-users] Errors while building. Help please

Aravind Reddy Gayam aravindr at buffalo.edu
Thu Mar 31 14:18:19 EDT 2011


Here is what I get

anusha at anusha-HP-G60-Notebook-PC:~/Documents/parsec-2.1/bin$ ./parsecmgmt -a
build -p vips -c gcc-pthreads
[PARSEC] Packages to build:  vips

[PARSEC] [========== Building package vips ==========]
[PARSEC] [---------- Analyzing package vips ----------]
[PARSEC] vips depends on: glib libxml2 zlib
[PARSEC] [---------- Analyzing package glib ----------]
[PARSEC] Package glib already exists, proceeding.
[PARSEC] [---------- Analyzing package libxml2 ----------]
[PARSEC] libxml2 depends on: zlib
[PARSEC] [---------- Analyzing package zlib ----------]
[PARSEC] Package zlib already exists, proceeding.
[PARSEC] [---------- Building package libxml2 ----------]
[PARSEC] Error: Need 'configure' script or a '[Mm]akefile' to build package
libxml2.
anusha at anusha-HP-G60-Notebook-PC:~/Documents/parsec-2.1/bin$

I already executed the command. So, we see that glib and zlib is already
existing.


On Thu, Mar 31, 2011 at 2:14 PM, Yungang Bao <ybao at cs.princeton.edu> wrote:

> Could you please show the detail log? From where you run "parsecmgmt" to
> where the error occurs.
>
> Yungang
>
> ----- Original Message -----
> From: "Aravind Reddy Gayam" <aravindr at buffalo.edu>
> To: "PARSEC Users" <parsec-users at lists.cs.princeton.edu>
> Sent: Thursday, March 31, 2011 1:58:05 PM
> Subject: Re: [parsec-users] Errors while building. Help please
>
>
> I have checked the file : configure.
> I fond it!!!
>
> But still it does not work. Do you think it some other problem.
>
>
> On Thu, Mar 31, 2011 at 1:51 PM, Yungang Bao < ybao at cs.princeton.edu >
> wrote:
>
>
> Please check if there exists the "configure" file in your
> "pkgs/libs/libxml2/src/". If not, you could download and update libxml2
> directory.
>
>
> Best Regards,
> Yungang
>
> ----- Original Message -----
> From: "Aravind Reddy Gayam" < aravindr at buffalo.edu >
> To: "PARSEC Users" < parsec-users at lists.cs.princeton.edu >
>
>
>
> Sent: Thursday, March 31, 2011 1:31:46 PM
> Subject: Re: [parsec-users] Errors while building. Help please
>
>
> Hello Yungang
>
> I have followed the instructions you have given. Thanks.
>
> After a lot of execution, I land up in this error saying :
>
> .
> .
> .
> cd
> /home/anusha/Documents/parsec-2.1/bin/../pkgs/libs/zlib/inst/amd64-linux.gcc-pthreads/lib;
> chmod 755 libz.a
> cd
> /home/anusha/Documents/parsec-2.1/bin/../pkgs/libs/zlib/inst/amd64-linux.gcc-pthreads/lib;
> if test -f libz.so.1.2.3; then \
> rm -f libz.so libz.so.1; \
> ln -s libz.so.1.2.3 libz.so; \
> ln -s libz.so.1.2.3 libz.so.1; \
> (ldconfig || true) >/dev/null 2>&1; \
> fi
> cp zlib.3
> /home/anusha/Documents/parsec-2.1/bin/../pkgs/libs/zlib/inst/amd64-linux.gcc-pthreads/share/man/man3
> chmod 644
> /home/anusha/Documents/parsec-2.1/bin/../pkgs/libs/zlib/inst/amd64-linux.gcc-pthreads/share/man/man3/zlib.3
> [PARSEC] [---------- Building package libxml2 ----------]
> [PARSEC] Error: Need 'configure' script or a '[Mm]akefile' to build package
> libxml2.
>
> I dont know what kind of a script has to provided to build the libxml2
> package.
>
> Can you please suggest me something.
>
> Thanks
> Aravind
>
>
>
> On Thu, Mar 31, 2011 at 12:47 PM, Yungang Bao < ybao at cs.princeton.edu >
> wrote:
>
>
> You could follow these instructions:
> 1) Modify "CC_HOME" in config/gcc.bldconf;
> 2) Run "source env.sh"
> 3) Run parsecmgmt
>
> There is some information you can use:
> 1) Run "man parsec" and "man parsecmgmt" to see the manuals
> 2) A Tutorial at HPCA'09:
> http://parsec.cs.princeton.edu/download/tutorial/2.0/parsec-2.0-tutorial.pdf
>
> Best Regards,
>
> Yungang
>
> ----- Original Message -----
> From: "Aravind Reddy Gayam" < aravindr at buffalo.edu >
>
>
>
> To: "PARSEC Users" < parsec-users at lists.cs.princeton.edu >
> Sent: Thursday, March 31, 2011 12:20:39 AM
> Subject: Re: [parsec-users] Errors while building. Help please
>
>
> no i haven't done it.
>
> can u plzz tell me the necessary steps to be followed.
>
> thanks
>
>
> On Wed, Mar 30, 2011 at 5:52 PM, Yungang Bao < ybao at cs.princeton.edu >
> wrote:
>
>
> Hi Aravind,
>
> Did you run "source env.sh" to set up environment variables before you ran
> parsecmgmt?
>
> Yungang
>
>
> ----- Original Message -----
> From: "Aravind Reddy Gayam" < aravindr at buffalo.edu >
>
> To: parsec-users at lists.cs.princeton.edu
>
>
>
> Sent: Wednesday, March 30, 2011 12:30:58 AM
> Subject: [parsec-users] Errors while building. Help please
>
>
> Hello all
>
> I am new to linux and obviously to pasec.
>
> I was trying to build the parsecmgmt initially for some chosen application
> (say vips).
>
> But I landed up in errors.
>
> This is what I have done:
>
> ./parsecmgmt -a build -p vips -c gcc-pthreads
>
> Can somebody help me (I set the PATH variable properly).
>
> I got the following:
>
> anusha at anusha-HP-G60-Notebook-PC:~/Documents/parsec-2.1/bin$ ./parsecmgmt
> -a build -p vips -c gcc-pthreads
> /home/anusha/Documents/parsec-2.1/bin/../config/gcc.bldconf: line 92: cat:
> command not found
> /home/anusha/Documents/parsec-2.1/bin/../config/gcc.bldconf: line 93: cat:
> command not found
> ./parsecmgmt: line 605: date: command not found
> ./parsecmgmt: line 610: mkdir: command not found
> ./parsecmgmt: line 993: cat: command not found
> ./parsecmgmt: line 993:
> /home/anusha/Documents/parsec-2.1/bin/../log/amd64-linux.gcc-pthreads/build_.log:
> No such file or directory
> ./parsecmgmt: line 994:
> /home/anusha/Documents/parsec-2.1/bin/../log/amd64-linux.gcc-pthreads/build_.log:
> No such file or directory
> ./parsecmgmt: line 995:
> /home/anusha/Documents/parsec-2.1/bin/../log/amd64-linux.gcc-pthreads/build_.log:
> No such file or directory
> tee:
> /home/anusha/Documents/parsec-2.1/bin/../log/amd64-linux.gcc-pthreads/build_.log:
> No such file or directory
> [PARSEC] Packages to build: vips
> tee:
> /home/anusha/Documents/parsec-2.1/bin/../log/amd64-linux.gcc-pthreads/build_.log:
> No such file or directory
>
> tee:
> /home/anusha/Documents/parsec-2.1/bin/../log/amd64-linux.gcc-pthreads/build_.log:
> No such file or directory
> [PARSEC] [========== Building package vips ==========]
> tee:
> /home/anusha/Documents/parsec-2.1/bin/../log/amd64-linux.gcc-pthreads/build_.log:
> No such file or directory
> [PARSEC] [---------- Analyzing package vips ----------]
> tee:
> /home/anusha/Documents/parsec-2.1/bin/../log/amd64-linux.gcc-pthreads/build_.log:
> No such file or directory
> [PARSEC] vips depends on: glib libxml2 zlib
> tee:
> /home/anusha/Documents/parsec-2.1/bin/../log/amd64-linux.gcc-pthreads/build_.log:
> No such file or directory
> [PARSEC] [---------- Analyzing package glib ----------]
> tee:
> /home/anusha/Documents/parsec-2.1/bin/../log/amd64-linux.gcc-pthreads/build_.log:
> No such file or directory
> [PARSEC] glib does not depend on any other packages.
> tee:
> /home/anusha/Documents/parsec-2.1/bin/../log/amd64-linux.gcc-pthreads/build_.log:
> No such file or directory
> [PARSEC] [---------- Building package glib ----------]
> ./parsecmgmt: line 770: mkdir: command not found
> ./parsecmgmt: line 772: pushd:
> /home/anusha/Documents/parsec-2.1/bin/../pkgs/libs/glib/obj/amd64-linux.gcc-pthreads:
> No such file or directory
> tee:
> /home/anusha/Documents/parsec-2.1/bin/../log/amd64-linux.gcc-pthreads/build_.log:
> No such file or directory
> [PARSEC] Running 'env
> /home/anusha/Documents/parsec-2.1/bin/../pkgs/libs/glib/src/configure
> --disable-shared --enable-threads --with-threads=posix
> --prefix=/home/anusha/Documents/parsec-2.1/bin/../pkgs/libs/glib/inst/amd64-linux.gcc-pthreads':
> /home/anusha/Documents/parsec-2.1/bin/../pkgs/libs/glib/src/configure: 49:
> chmod: not found
> /home/anusha/Documents/parsec-2.1/bin/../pkgs/libs/glib/src/configure: 49:
> rm: not found
> tee:
> /home/anusha/Documents/parsec-2.1/bin/../log/amd64-linux.gcc-pthreads/build_.log:
> No such file or directory
> /home/anusha/Documents/parsec-2.1/bin/../pkgs/libs/glib/src/configure: line
> 42: chmod: command not found
> /home/anusha/Documents/parsec-2.1/bin/../pkgs/libs/glib/src/configure: line
> 48: rm: command not found
> /home/anusha/Documents/parsec-2.1/bin/../pkgs/libs/glib/src/configure: line
> 486: rm: command not found
> /home/anusha/Documents/parsec-2.1/bin/../pkgs/libs/glib/src/configure: line
> 490: rm: command not found
> /home/anusha/Documents/parsec-2.1/bin/../pkgs/libs/glib/src/configure: line
> 491: mkdir: command not found
> /home/anusha/Documents/parsec-2.1/bin/../pkgs/libs/glib/src/configure: line
> 507: rm: command not found
> /home/anusha/Documents/parsec-2.1/bin/../pkgs/libs/glib/src/configure: line
> 519: cat: command not found
> /home/anusha/Documents/parsec-2.1/bin/../pkgs/libs/glib/src/configure: line
> 523: chmod: command not found
> /home/anusha/Documents/parsec-2.1/bin/../pkgs/libs/glib/src/configure: line
> 529: rm: command not found
> /home/anusha/Documents/parsec-2.1/bin/../pkgs/libs/glib/src/configure: line
> 698: sed: command not found
> /home/anusha/Documents/parsec-2.1/bin/../pkgs/libs/glib/src/configure: line
> 1081: sed: command not found
> /home/anusha/Documents/parsec-2.1/bin/../pkgs/libs/glib/src/configure: line
> 1100: sed: command not found
> /home/anusha/Documents/parsec-2.1/bin/../pkgs/libs/glib/src/configure: line
> 1297: sed: command not found
> /home/anusha/Documents/parsec-2.1/bin/../pkgs/libs/glib/src/configure: line
> 1398: ls: command not found
> configure: error: Working directory cannot be determined
> tee:
> /home/anusha/Documents/parsec-2.1/bin/../log/amd64-linux.gcc-pthreads/build_.log:
> No such file or directory
> [PARSEC] Error: 'env
> /home/anusha/Documents/parsec-2.1/bin/../pkgs/libs/glib/src/configure
> --disable-shared --enable-threads --with-threads=posix
> --prefix=/home/anusha/Documents/parsec-2.1/bin/../pkgs/libs/glib/inst/amd64-linux.gcc-pthreads'
> failed.
> ./parsecmgmt: line 787: popd: directory stack empty
>
>
>
> Thanks,
> Aravind.
>
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